simuPOP
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  • Front Matter
  • Introduction
  • Loading and running simuPOP
  • Individuals and Populations
    • Genotypic structure
    • Individual
    • Population
  • simuPOP Operators
  • Evolving populations
  • Utility Modules
  • A real world example
  • Front Matter
  • simuPOP Components
  • Operator References
  • Utility Modules
simuPOP
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Individuals and PopulationsΒΆ

  • Genotypic structure
    • Haploid, diploid and haplodiploid populations
    • Autosomes, sex chromosomes, mitochondrial, and other types of chromosomes *
    • Information fields
  • Individual
    • Access individual genotype
    • individual sex, affection status and information fields
  • Population
    • Access and change individual genotype
    • Subpopulations
    • Virtual subpopulations and virtual splitters *
    • Advanced virtual subpopulation splitters **
    • Access individuals and their properties
    • Attach arbitrary auxillary information using information fields
    • Keep track of ancestral generations
    • Change genotypic structure of a population
    • Remove or extract individuals and subpopulations from a population
    • Store arbitrary population information as population variables
    • Save and load a population
    • Import and export datasets in unsupported formats *
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