simuPOP
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Front Matter
Introduction
Loading and running simuPOP
Individuals and Populations
simuPOP Operators
Evolving populations
Utility Modules
A real world example
Front Matter
simuPOP Components
Operator References
Utility Modules
simuPOP
Docs
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Index
Index – S
save() (Pedigree method)
(Population method)
saveCSV() (in module simuPOP.utils)
SavePopulation (built-in class)
SavePopulation() (SavePopulation method)
seed() (RNG method)
selection
SelfingGenoTransmitter (built-in class)
SelfingGenoTransmitter() (SelfingGenoTransmitter method)
SelfMating (built-in class)
SelfMating() (SelfMating method)
SequentialParentChooser (built-in class)
SequentialParentChooser() (SequentialParentChooser method)
SequentialParentsChooser (built-in class)
SequentialParentsChooser() (SequentialParentsChooser method)
set() (RNG method)
setAffected() (Individual method)
setAllele() (Individual method)
setAlleleLineage() (Individual method)
setAncestralDepth() (Population method)
setGenotype() (Individual method)
(Population method)
setIndInfo() (Population method)
setInfo() (Individual method)
setInfoFields() (Population method)
setLineage() (Individual method)
(Population method)
setOptions() (built-in function)
(in module simuOpt)
setRNG
setRNG() (built-in function)
setSex() (Individual method)
setSubPopByIndInfo() (Population method)
setSubPopName() (Population method)
SettlementOfNewWorldModel (class in simuPOP.demography)
SettlementOfNewWorldModel() (simuPOP.demography.SettlementOfNewWorldModel method)
setVirtualSplitter() (Population method)
sex() (Individual method)
SexSplitter (built-in class)
SexSplitter() (SexSplitter method)
simuBackward() (simuPOP.utils.TrajectorySimulator method)
simuForward() (simuPOP.utils.TrajectorySimulator method)
simulateBackwardTrajectory() (in module simuPOP.utils)
simulateForwardTrajectory() (in module simuPOP.utils)
Simulator
(built-in class)
Simulator() (Simulator method)
simuOpt (module)
simuPOP.demography (module)
simuPOP.gsl (module)
simuPOP.sampling (module)
simuPOP.utils (module)
snpMutate() (built-in function)
SNPMutator (built-in class)
SNPMutator() (SNPMutator method)
sortIndividuals() (Population method)
SplitEvent (class in simuPOP.demography)
SplitEvent() (simuPOP.demography.SplitEvent method)
splitSubPop() (Population method)
SplitSubPops
(built-in class)
splitSubPops() (built-in function)
SplitSubPops() (SplitSubPops method)
Stat (built-in class)
stat() (built-in function)
Stat() (Stat method)
stepwiseMutate() (built-in function)
StepwiseMutator (built-in class)
StepwiseMutator() (StepwiseMutator method)
subPopBegin() (Population method)
subPopByName() (Population method)
subPopEnd() (Population method)
subPopIndPair() (Population method)
subPopName() (Population method)
subPopNames() (Population method)
subPopSize() (Population method)
subPopSizes() (Population method)
SummaryTagger (built-in class)
SummaryTagger() (SummaryTagger method)
swap() (Population method)
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